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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PSME_00030259-RA |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
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Family |
NAC |
Protein Properties |
Length: 339aa MW: 38600.4 Da PI: 8.1102 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PSME_00030259-RA | genome | PRS | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 169.5 | 1.1e-52 | 13 | 140 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93
lppGfrF Ptdeelvv+yL+kkv +++l++ +i evd+yk++Pw+Lp+k+ +ekewyfF++rd+ky++g+r+nra+ sgyWkatg dk+++
PSME_00030259-RA 13 LPPGFRFFPTDEELVVHYLCKKVVSHPLPA-FIIGEVDLYKYDPWQLPEKALFGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIT 104
79***************************9.67***************8888899*************************************9 PP
NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
+ +++ vg+kk Lvfykg+apkg+kt+W+mheyr+
PSME_00030259-RA 105 TCgGKKRVGVKKALVFYKGKAPKGSKTNWIMHEYRM 140
9866777***************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 339 aa
Download sequence Send
to blast |
MTEKGGSGGQ IDLPPGFRFF PTDEELVVHY LCKKVVSHPL PAFIIGEVDL YKYDPWQLPE 60 KALFGEKEWY FFTPRDRKYP NGSRPNRAAG SGYWKATGAD KPITTCGGKK RVGVKKALVF 120 YKGKAPKGSK TNWIMHEYRM AEINLAARKK NTLRLDDWVL CRIYNKKSSA EKLEEKKLAE 180 EMESRQEMEE AIEQQHKSRP LDPSHTDAST VSAEGGLAST DSSILVSQLP GAMNLSSDHH 240 QNPFYQHHST DEVQQINMKL ANQFIQKQQQ HHSTDEVQVN MKLANQLIQK QQQSGQSLNF 300 NLGLDGVQNP FFHLDHSESS SLFSPYPEYI DSYSIQRSY
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 2e-82 | 10 | 172 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-82 | 10 | 172 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-82 | 10 | 172 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-82 | 10 | 172 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
4dul_A | 2e-82 | 10 | 172 | 14 | 171 | NAC domain-containing protein 19 |
4dul_B | 2e-82 | 10 | 172 | 14 | 171 | NAC domain-containing protein 19 |
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