PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PSME_00030124-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
Family BES1
Protein Properties Length: 244aa    MW: 26570.9 Da    PI: 9.8573
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PSME_00030124-RAgenomePRSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822135.17.4e-42681378
            DUF822  3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskplee 78
                      +gr p+ kErE n +RERrRRa aaki+aGLR  Gny+lpk++D neVlkALc+eAGw+v++DGttyr  +   ++
  PSME_00030124-RA  6 GGRLPSSKEREENTKRERRRRAKAAKIFAGLRLFGNYNLPKHCDSNEVLKALCAEAGWIVHADGTTYRPDCTISSS 81
                      799*****************************************************************88876633 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.7E-38680IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    Send to blast
MAMTWGGRLP SSKEREENTK RERRRRAKAA KIFAGLRLFG NYNLPKHCDS NEVLKALCAE  60
AGWIVHADGT TYRPDCTISS SSPAVEATYI ESEKGSLIPW LKGLGSNRLA AQRALPHLQI  120
MPSGHGSASV TPPLTPPIVR PPSWSFQGMG HSNSESGFSI QGVDAHWTVA EYSSMITKNV  180
GISASTKGNE NVSASSFIPL MVSNGINAFE EQKIQHLQPE QLALTLGSSS THKSSRKAYH  240
RQDN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-182776391440Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-182776391440Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-182776391440Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-182776391440Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009352718.12e-33PREDICTED: BES1/BZR1 homolog protein 4-like
SwissprotQ9ZV882e-24BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLD5ACJ31e-65D5ACJ3_PICSI; Uncharacterized protein
STRINGXP_009352718.17e-33(Pyrus x bretschneideri)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-20BES1/BZR1 homolog 4