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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
PSME_00026945-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
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| Family |
WOX |
| Protein Properties |
Length: 293aa MW: 32921.9 Da PI: 7.0001 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PSME_00026945-RA | genome | PRS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 56.4 | 5e-18 | 54 | 114 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
++R+++++eq+++Le+ F++ +p ++e++++ ++l ++ +++V++WFqNr+ + k+
PSME_00026945-RA 54 KPRWNPKPEQIRILESIFNSgMVNPPRDEIKRIRAQLqefgQVGDANVFYWFQNRKSRTKQ 114
89*****************99*************************************996 PP
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| 2 | Wus_type_Homeobox | 112.2 | 2.7e-36 | 53 | 116 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
+++RW+P+peQi+iLe++++sG+++P+++ei+ri+a+L+e+G+++d+NVfyWFQNrk+R +q+q
PSME_00026945-RA 53 PKPRWNPKPEQIRILESIFNSGMVNPPRDEIKRIRAQLQEFGQVGDANVFYWFQNRKSRTKQRQ 116
689***********************************************************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0008284 | Biological Process | positive regulation of cell proliferation |
| GO:0009735 | Biological Process | response to cytokinin |
| GO:0009793 | Biological Process | embryo development ending in seed dormancy |
| GO:0010075 | Biological Process | regulation of meristem growth |
| GO:0005634 | Cellular Component | nucleus |
| GO:0005737 | Cellular Component | cytoplasm |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 293 aa
Download sequence Send
to blast |
MNPNKHWPSM FKVKPSASHN QWHETSNSSA ISDQRPSYEG ASSENEERSQ PEPKPRWNPK 60
PEQIRILESI FNSGMVNPPR DEIKRIRAQL QEFGQVGDAN VFYWFQNRKS RTKQRQRHLH 120
SAESSRCNAE KSTTDHSKAI MDVANTTANS LHNIGTSYSS AMPATAFSAH KEHSYHVQMN 180
GEISNDQCSH MQTVATAAGR GGIFNEGEDV IYGRSITVLI NDIALEVPLG PINVKAVFGE 240
NAVLLHSTGQ PVLVNEWGFT LECLQHGAMY YVVCLIPTQN FIPLYLDKLP EYL
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| Functional Description ? help
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| Source |
Description |
| UniProt | Homeodomain transcription factor required for meristem growth and early development (PubMed:15753038). Promotes cell proliferation and prevents premature differentiation in meristematic tissues during postembryonic development (PubMed:15753038). Essential for maintaining tissue growth during embryogenesis (PubMed:17706632). May act by repressing TSS to promote meristematic proliferation (PubMed:21185286). Involved in the transcriptional activation of a subset of cytokinin response factors (PubMed:20110319). May act as a negative regulator of cytokinin signaling in the dark (PubMed:21057190). {ECO:0000269|PubMed:15753038, ECO:0000269|PubMed:17706632, ECO:0000269|PubMed:20110319, ECO:0000269|PubMed:21057190, ECO:0000303|PubMed:21185286}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated in the zygote after fertilization by the transcription factor WRKY2. {ECO:0000269|PubMed:21316593}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | GU944670 | 0.0 | GU944670.1 Picea abies putative wuschel homeobox protein WOX8/9 (wox8/9) mRNA, complete cds. |
| Publications
? help Back to Top |
- Wang W, et al.
Dwarf Tiller1, a Wuschel-related homeobox transcription factor, is required for tiller growth in rice.
PLoS Genet., 2014. 10(3): p. e1004154
[PMID:24625559] - Zhu T,Moschou PN,Alvarez JM,Sohlberg JJ,von Arnold S
Wuschel-related homeobox 8/9 is important for proper embryo patterning in the gymnosperm Norway spruce.
J. Exp. Bot., 2014. 65(22): p. 6543-52
[PMID:25205582] - Raines T, et al.
The cytokinin response factors modulate root and shoot growth and promote leaf senescence in Arabidopsis.
Plant J., 2016. 85(1): p. 134-47
[PMID:26662515] - Dolzblasz A, et al.
Stem Cell Regulation by Arabidopsis WOX Genes.
Mol Plant, 2016. 9(7): p. 1028-39
[PMID:27109605] - Blein T,Pautot V,Laufs P
Combinations of Mutations Sufficient to Alter Arabidopsis Leaf Dissection.
Plants (Basel), 2013. 2(2): p. 230-47
[PMID:27137374]
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