 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
PSME_00023963-RA |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
|
Family |
WOX |
Protein Properties |
Length: 300aa MW: 35523.2 Da PI: 5.9973 |
Description |
WOX family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PSME_00023963-RA | genome | PRS | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 47.3 | 3.5e-15 | 59 | 116 | 2 | 54 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRak 54
++R++++keq ++L Fe+ +ps++e++ ++++l ++++++V++WF+Nr+++
PSME_00023963-RA 59 KPRWKPKKEQKRILIPKFESgMVKPSRNEIKTITAQLqefgQVEDANVFYWFHNRKYR 116
89*****************99***********************************98 PP
|
2 | Wus_type_Homeobox | 78.6 | 8.3e-26 | 58 | 116 | 2 | 60 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaR 60
+++RW P++eQ +iL ++sG++ P+++ei+ ita+L+e+G++ed+NVfyWF Nrk R
PSME_00023963-RA 58 TKPRWKPKKEQKRILIPKFESGMVKPSRNEIKTITAQLQEFGQVEDANVFYWFHNRKYR 116
689******************************************************88 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 300 aa
Download sequence Send
to blast |
MDNMKSKPRQ SWTSMFKVKP STSDNQGYGS SNSSAISVQR PCYEGTSSAN EERSWHKTKP 60 RWKPKKEQKR ILIPKFESGM VKPSRNEIKT ITAQLQEFGQ VEDANVFYWF HNRKYRIFNR 120 VERTEKNTKA IINVASNTAD SLYNTGKWYS SYVLEDPFFT QDDPFFTHQD RFFHTGEWYS 180 SYDPFFTQDD PFFTHQDRFF HTGEWYSSYD PFFTQDDPFF THHDNRFFIH QEDFHMQMNE 240 EMSNDQCSSM QAVATAAGVL NEGTFADTTG TIFSYPRSIF SLLYLLCSIF SSVEYYYEYE
|
Annotation -- Protein
? help Back to Top |
Source |
Hit ID |
E-value |
Description |
TrEMBL | D5LMH9 | 4e-48 | D5LMH9_PICAB; Putative wuschel homeobox protein WOX8/9 |