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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
PSME_00023319-RA |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
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| Family |
NAC |
| Protein Properties |
Length: 385aa MW: 43549.8 Da PI: 6.7961 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PSME_00023319-RA | genome | PRS | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 167.9 | 3.4e-52 | 12 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93
lppGfrF Ptd+elvv+yL++k++++ + + +i+evd+yk++Pw+Lp+k+ +ekewyfF++rd+ky++g+r+nra+ sgyWkatg dk+++
PSME_00023319-RA 12 LPPGFRFFPTDDELVVHYLCRKAASQAIAV-PIIAEVDLYKFDPWQLPEKALFGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIT 103
79*************************999.88***************8888899************************************** PP
NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
+k +++ vg+kk Lvfy g+apkg+kt+W+mheyrl
PSME_00023319-RA 104 AKgSNKRVGIKKALVFYVGKAPKGNKTNWIMHEYRL 139
*966677***************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009611 | Biological Process | response to wounding |
| GO:0009788 | Biological Process | negative regulation of abscisic acid-activated signaling pathway |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 385 aa
Download sequence Send
to blast |
MGRQNAEAQL NLPPGFRFFP TDDELVVHYL CRKAASQAIA VPIIAEVDLY KFDPWQLPEK 60
ALFGEKEWYF FTPRDRKYPN GSRPNRAAGS GYWKATGADK PITAKGSNKR VGIKKALVFY 120
VGKAPKGNKT NWIMHEYRLA DVNRSAKKKG SLRLDDWVLC RIYNKKSSAE KLAKDQEWSS 180
EEAMEQFHEE IDEKVPGILH TGNTVMNSSI EHSERISQDS TRSAPSPNCR TVSNHDSRAS 240
AITSLRYNSN PIFEQNLNIS NASSAPMELP ELVPIFSSMN NHRTNYDSAD LIPPILLTDS 300
SCSMQSSHDH KSEKEEVQSS FKLEELMQQQ QENAGLNQSM FTFGFDSLQN PFPQLDQIQP 360
PLINDPFQDY LASLTAPGYL QRSSY
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