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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
PSME_00021124-RA |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
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Family |
WOX |
Protein Properties |
Length: 329aa MW: 37927.2 Da PI: 4.2787 |
Description |
WOX family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PSME_00021124-RA | genome | PRS | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 35.3 | 1.9e-11 | 86 | 142 | 3 | 54 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRak 54
kRt +q ++L Fe+ +ps++e+++++++l ++++++V++WF+N +++
PSME_00021124-RA 86 KRTEEDINQKRILIPKFESsMVKPSRHEIKRITAQLqefgQVEDANVFYWFHNTKYR 142
78999999**********98**********************************997 PP
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2 | Wus_type_Homeobox | 59.3 | 9e-20 | 87 | 142 | 5 | 60 |
Wus_type_Homeobox 5 RWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaR 60
R +Q +iL ++s ++ P+++ei+rita+L+e+G++ed+NVfyWF N k R
PSME_00021124-RA 87 RTEEDINQKRILIPKFESSMVKPSRHEIKRITAQLQEFGQVEDANVFYWFHNTKYR 142
5555668999*******************************************988 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 329 aa
Download sequence Send
to blast |
MSHHDEADED EGNDDDDDDE NEDDDGGDED EAMNNMKSKP RQSWTSMFKV KPSTSDNQGN 60 QGYASSNSSA ISVQRPRYEA EVETNKRTEE DINQKRILIP KFESSMVKPS RHEIKRITAQ 120 LQEFGQVEDA NVFYWFHNTK YRIFNRVERT EKNTKAIINV ASNTADSLYN TGESYSSYVL 180 EDPFFTQDDP FFTHQDRFFH TGEWYSSYDP FFTHDDPFFT HHDNPFFIHQ EDFHMQMNEE 240 MSNDQCSSMQ AVATAAGVFN EGGSFSYEHL IPILINKIPV EVPVGSINVR DAFGENAVLL 300 HSIGEPILVN EWGSPWNVCS KELSITWYI
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Annotation -- Protein
? help Back to Top |
Source |
Hit ID |
E-value |
Description |
TrEMBL | D5LMH9 | 6e-64 | D5LMH9_PICAB; Putative wuschel homeobox protein WOX8/9 |