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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PSME_00019230-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
|
| Family |
LBD |
| Protein Properties |
Length: 184aa MW: 20209 Da PI: 5.8337 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PSME_00019230-RA | genome | PRS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 99.5 | 3.4e-31 | 6 | 93 | 15 | 101 |
DUF260 15 dCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkeel 101
dCv+apyf++++ +++fa vhk+FGasnv+kll +lp +r +a+ ++ yeA+ar++dPvyG+v +i++lqqq+++l+aela ++++l
PSME_00019230-RA 6 DCVFAPYFCSDEgAAHFATVHKIFGASNVSKLLLHLPMPDRCEAVVTISYEAQARLQDPVYGCVTHIFALQQQVASLQAELAFMQAQL 93
7*********9989********************************************************************999875 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 184 aa
Download sequence Send
to blast |
MDNILDCVFA PYFCSDEGAA HFATVHKIFG ASNVSKLLLH LPMPDRCEAV VTISYEAQAR 60
LQDPVYGCVT HIFALQQQVA SLQAELAFMQ AQLASRVSSG STSISANHPV ISSSSYSQHL 120
QFPAHLSLPC QPIPRPYNAL LSRVKEENSC GFATYMDCDF SMSPSDSSSP LMEVLQRCRS 180
LEEK
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