 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
PSME_00018172-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
|
| Family |
bHLH |
| Protein Properties |
Length: 221aa MW: 25149.6 Da PI: 4.6503 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PSME_00018172-RA | genome | PRS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 41.7 | 2e-13 | 59 | 103 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+ ErrRR+r+N+++ Lr ++P +K++Ka+i e A++YI++Lq
PSME_00018172-RA 59 TISERRRRRRLNERLYSLRAIVPVI-----TKMDKASIIEDAINYIQQLQ 103
688*********************7.....7******************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 221 aa
Download sequence Send
to blast |
MLLCTSKLNL QMSGITDRMF DSCACPVSSD EGVGDGSSLC NVFSSDGRRL SYGAASRNTI 60
SERRRRRRLN ERLYSLRAIV PVITKMDKAS IIEDAINYIQ QLQNQVKVVE EDVVHLKENG 120
TPPSENITSE RSQEETCNEC LEFDVSEVKE NVYSIFLYCK CSPRVVLEVN RIIESMEMSV 180
KYANFNSFDG YMLTNIIAQK EDEEKLQVEA LKKNITEVIM E
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 61 | 68 | ERRRRRRL |
| 2 | 62 | 67 | RRRRRR |
| 3 | 65 | 72 | RRRLNERL |
