 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PSME_00014183-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
|
| Family |
WOX |
| Protein Properties |
Length: 154aa MW: 18134.2 Da PI: 10.1702 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PSME_00014183-RA | genome | PRS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 49.7 | 6.3e-16 | 17 | 74 | 2 | 54 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRak 54
++R+++tkeq ++L Fe+ +ps++e++ ++++l ++++ +V++WF+Nr+++
PSME_00014183-RA 17 KPRWKPTKEQKRILIPKFESgMVKPSRHEIKTITAQLqefgQVEDGNVFYWFHNRKYR 74
89*****************99***********************************98 PP
|
| 2 | Wus_type_Homeobox | 79.2 | 5.6e-26 | 16 | 74 | 2 | 60 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaR 60
+++RW Pt+eQ +iL ++sG++ P+++ei+ ita+L+e+G++ed NVfyWF Nrk R
PSME_00014183-RA 16 TKPRWKPTKEQKRILIPKFESGMVKPSRHEIKTITAQLQEFGQVEDGNVFYWFHNRKYR 74
689******************************************************88 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 154 aa
Download sequence Send
to blast |
MDGTSSANKE RSWHKTKPRW KPTKEQKRIL IPKFESGMVK PSRHEIKTIT AQLQEFGQVE 60
DGNVFYWFHN RKYRIFNPVE RTEKNTKAII NVANNTADSL YNTGQSYSSY VLEDPFFTQD 120
DPFFTHQDRF FHTGSIFHTG RSIFHTSRQS ISHT
|
