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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PSME_00012317-RA |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
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Family |
NAC |
Protein Properties |
Length: 277aa MW: 31041.6 Da PI: 5.0406 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PSME_00012317-RA | genome | PRS | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 48.5 | 2.8e-15 | 3 | 47 | 85 | 128 |
NAM 85 atgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
atg dk++++k +++ vg+kk Lvfy g+ap+g+kt+W+mheyrl
PSME_00012317-RA 3 ATGADKPITAKgGKKRVGIKKALVFYVGKAPNGSKTNWLMHEYRL 47
89********966777***************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 277 aa
Download sequence Send
to blast |
MSATGADKPI TAKGGKKRVG IKKALVFYVG KAPNGSKTNW LMHEYRLADL NRPARKKGNL 60 RLDDWVLCRI YKKKISAEKL ALEQKENSDD LPMETIDEKE MEIQPTSTSI EHSGSEESKP 120 YSDHLCKLEP STTSYNAVPP CALFMNSNIC FQNSPASFSG STLEAPVQNT AFNPISSSLN 180 DQWTNCNSTD LISGLLTDSN RSQPLSFLKP ISEKGEVQSS FKLENLSQEQ QQSEFHFSLE 240 DIQNPFDYLD QIKFSDAYQD YSTSLSSSDY LPSFYPN
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 6e-28 | 3 | 79 | 100 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 6e-28 | 3 | 79 | 100 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 6e-28 | 3 | 79 | 100 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 6e-28 | 3 | 79 | 100 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 7e-28 | 3 | 79 | 103 | 174 | NAC domain-containing protein 19 |
3swm_B | 7e-28 | 3 | 79 | 103 | 174 | NAC domain-containing protein 19 |
3swm_C | 7e-28 | 3 | 79 | 103 | 174 | NAC domain-containing protein 19 |
3swm_D | 7e-28 | 3 | 79 | 103 | 174 | NAC domain-containing protein 19 |
3swp_A | 7e-28 | 3 | 79 | 103 | 174 | NAC domain-containing protein 19 |
3swp_B | 7e-28 | 3 | 79 | 103 | 174 | NAC domain-containing protein 19 |
3swp_C | 7e-28 | 3 | 79 | 103 | 174 | NAC domain-containing protein 19 |
3swp_D | 7e-28 | 3 | 79 | 103 | 174 | NAC domain-containing protein 19 |
4dul_A | 6e-28 | 3 | 79 | 100 | 171 | NAC domain-containing protein 19 |
4dul_B | 6e-28 | 3 | 79 | 100 | 171 | NAC domain-containing protein 19 |
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