 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
PSME_00012282-RA |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
|
Family |
NAC |
Protein Properties |
Length: 331aa MW: 37043.1 Da PI: 9.9989 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PSME_00012282-RA | genome | PRS | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 87.8 | 1.9e-27 | 197 | 271 | 53 | 128 |
NAM 53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+++ ewyfFs++d+ky++ +++nrat++ yWka +d++++ + +++g+kktLvfy+grap+ge++dWvmhey l
PSME_00012282-RA 197 STDMEWYFFSPHDRKYPNCSHTNRATEARYWKANERDRQIYF-RASTIGIKKTLVFYRGRAPQGERSDWVMHEYLL 271
4678**************************************.8899***************************76 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 331 aa
Download sequence Send
to blast |
MREVNGEGRR TIQAELSSIV GLGAASFTSI ASAAPTIMMT MTNRVAYAYF PKPSIVAHAH 60 KKPASATKKF RPTDEELISC YLKGKLSHGL EVLELKEYGI HKSSAPSKLL YGRLRIHKGT 120 GTHEGALGIT KVYVDAGKWL VEETVLVDAL SRRIPLRNLS CPALAWSGIS LVLMIGSTPM 180 VHALIGLLKL EKVFLPSTDM EWYFFSPHDR KYPNCSHTNR ATEARYWKAN ERDRQIYFRA 240 STIGIKKTLV FYRGRAPQGE RSDWVMHEYL LKENECEAGP SLQVIHGNTL TTTVIINEIH 300 PDVKEVFLIG ANSKLGRAIS LYLCKRLCIK K
|
3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
3ulx_A | 3e-23 | 183 | 271 | 48 | 140 | Stress-induced transcription factor NAC1 |