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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PSME_00009984-RA |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
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Family |
NAC |
Protein Properties |
Length: 275aa MW: 31633.4 Da PI: 6.8662 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PSME_00009984-RA | genome | PRS | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 138.1 | 5.5e-43 | 21 | 146 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93
pGfrF Pt+eelv +yLkk v+g + + ++ i+++d+y+++Pw+Lp ++ +e +w fF++r +k+ r+nr+t sgyWkatg d++v
PSME_00009984-RA 21 LPGFRFYPTEEELVGFYLKKTVQGGQQPQFDRiIPTLDLYRYDPWELPGLASVGEMQWLFFVPRCHKKC--ARPNRMTVSGYWKATGADRTVR 111
59*********************9996655544***************77778999*******999865..7********************* PP
NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
+ + +g kktLvfykg++p+g+ktdW+m+eyr+
PSME_00009984-RA 112 NDLLQCIGQKKTLVFYKGKNPRGQKTDWIMNEYRM 146
*99999***************************97 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 275 aa
Download sequence Send
to blast |
MAVQLEETYT DDTPQRDLMS LPGFRFYPTE EELVGFYLKK TVQGGQQPQF DRIIPTLDLY 60 RYDPWELPGL ASVGEMQWLF FVPRCHKKCA RPNRMTVSGY WKATGADRTV RNDLLQCIGQ 120 KKTLVFYKGK NPRGQKTDWI MNEYRMPDMS LSAPKKKMDL VLCRIYRKAV TQKSMEQLVK 180 PHHLEREEPV VTDMSIEQRV NSDEVEKKEP VISGDEGKSH SILDSVSCHS NPLVSLHHGV 240 VCSSLSEASD EARIFEGLVP IIFYEEIMEL KTPKA
|
3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 2e-40 | 22 | 168 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-40 | 22 | 168 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-40 | 22 | 168 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-40 | 22 | 168 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
4dul_A | 2e-40 | 22 | 168 | 19 | 165 | NAC domain-containing protein 19 |
4dul_B | 2e-40 | 22 | 168 | 19 | 165 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |