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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PSME_00009899-RA |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
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Family |
NAC |
Protein Properties |
Length: 308aa MW: 35253.3 Da PI: 6.9091 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PSME_00009899-RA | genome | PRS | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 139.8 | 1.6e-43 | 19 | 146 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLp.kkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92
pGfrF Pt+eel+ +yLkk+++ + l+++++i+++d+y+++Pw+Lp +++a ++++w+fF++rd+k++ r+nr t sgyWkatg+d++v
PSME_00009899-RA 19 PGFRFYPTEEELLGFYLKKRIQPGHgLNFDKIIPTLDLYQYDPWELPgLAHDAgDQQQWFFFVPRDRKKS-CPRPNRLTVSGYWKATGSDRAV 110
9********************98887999889***************5444442566**********986.58******************** PP
NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+++ + +glkk+Lvfykg+ap+g++tdW+m eyr+
PSME_00009899-RA 111 RNERLQCIGLKKILVFYKGKAPRGQRTDWIMMEYRM 146
**999*****************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 308 aa
Download sequence Send
to blast |
MPDKIWSNRV VKEELMDLPG FRFYPTEEEL LGFYLKKRIQ PGHGLNFDKI IPTLDLYQYD 60 PWELPGLAHD AGDQQQWFFF VPRDRKKSCP RPNRLTVSGY WKATGSDRAV RNERLQCIGL 120 KKILVFYKGK APRGQRTDWI MMEYRMPDLS SSATKKKIDM VLCRIYRKAA ARKSLEQRTR 180 PNDADKEEPV VSSDEDEEKS ALNVSSQSNP MTEAAKVSSL SYLDHDDVCS SLSKKEDESS 240 IFDNLEPIMF CEDQETSVLK TPESCKPPQL ELPKLSMDFL FSQRIATPNA LLATPSPLQI 300 PHSSIPGL
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 9e-42 | 19 | 171 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 9e-42 | 19 | 171 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 9e-42 | 19 | 171 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 9e-42 | 19 | 171 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-41 | 19 | 171 | 22 | 171 | NAC domain-containing protein 19 |
3swm_B | 1e-41 | 19 | 171 | 22 | 171 | NAC domain-containing protein 19 |
3swm_C | 1e-41 | 19 | 171 | 22 | 171 | NAC domain-containing protein 19 |
3swm_D | 1e-41 | 19 | 171 | 22 | 171 | NAC domain-containing protein 19 |
3swp_A | 1e-41 | 19 | 171 | 22 | 171 | NAC domain-containing protein 19 |
3swp_B | 1e-41 | 19 | 171 | 22 | 171 | NAC domain-containing protein 19 |
3swp_C | 1e-41 | 19 | 171 | 22 | 171 | NAC domain-containing protein 19 |
3swp_D | 1e-41 | 19 | 171 | 22 | 171 | NAC domain-containing protein 19 |
4dul_A | 9e-42 | 19 | 171 | 19 | 168 | NAC domain-containing protein 19 |
4dul_B | 9e-42 | 19 | 171 | 19 | 168 | NAC domain-containing protein 19 |
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |