 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PSME_00008362-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
|
| Family |
ERF |
| Protein Properties |
Length: 210aa MW: 24103 Da PI: 5.1938 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PSME_00008362-RA | genome | PRS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 53.6 | 5.6e-17 | 24 | 73 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++kG+r +k +grWv+eIr ++ r +++lg++ tae+Aa+a++aa +l+g
PSME_00008362-RA 24 QFKGIRMRK-WGRWVSEIRMTKT---REKIWLGSYKTAEQAARAYDAALYCLRG 73
69*****99.**********533...4*************************99 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 210 aa
Download sequence Send
to blast |
MEKPSQEHYS PSSTDEDRGQ NRRQFKGIRM RKWGRWVSEI RMTKTREKIW LGSYKTAEQA 60
ARAYDAALYC LRGPNAKFNF PDSVRAIPSV SSLSRQQIQV AAAKYALEGI PSTSTSPSIP 120
VEYNNKPKEK PESQPRPSVL ETKRSLDSQQ ILKALDLELW DSPFDGNGGL NLEKIPSIEE 180
ASVLEFIPTW QEEEQPEDYI FFDPTDLWNF
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
