PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PK29664.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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Family | WRKY | ||||||||
Protein Properties | Length: 470aa MW: 49828.3 Da PI: 8.8407 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.6 | 1.7e-30 | 75 | 134 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+a+d +++++tYeg+Hnh+ PK29664.1 75 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApSCPVRKQVQRCADDMSILITTYEGTHNHP 134 58***************************99****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.3E-31 | 60 | 136 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.18E-27 | 67 | 136 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 28.461 | 70 | 136 | IPR003657 | WRKY domain |
SMART | SM00774 | 9.1E-37 | 75 | 135 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.6E-27 | 76 | 134 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 470 aa Download sequence Send to blast |
AGTGGEPAVS NPSAASSFDE QLMINKEEAG ETWPPSKVLK TTAVKRSVTE DEVSQQNPAK 60 KTRVCVRVRC DTPTMNDGCQ WRKYGQKIAK GNPCPRAYYR CTVAPSCPVR KQVQRCADDM 120 SILITTYEGT HNHPLPVSAT AMASTTSAAA SMLLSGSTTS SNSGNHPSSA TTSATAELHR 180 FTTLDSSKWN LINNKQTTFY LPNSSSTTSY SSYSSSHPTI TLDLTSSNSS PLLNKFSTTT 240 TQSPNYPHHH HTLYPSSSLS FGPPSNNNIN SSDQYSNSNL SWINNNGFLN YGSSSQVLPY 300 NTRNQSLGTL ATLANKQNPS STTTSATHHV QNYKNSPTVA PTDQSSTTIA AATKAITADP 360 AFQSALAAAL TSIIGGARGG GGDNNNNNNV DLAQKLTWGS GTSCTDHYPR NQQQQLQSSS 420 SLPKGINGGN LTFLSPNNSM SFSSASKSST TATTASASPH SDHHTTDQTS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 9e-22 | 75 | 136 | 17 | 77 | Probable WRKY transcription factor 4 |
2lex_A | 9e-22 | 75 | 136 | 17 | 77 | Probable WRKY transcription factor 4 |
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Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009369334.1 | 1e-109 | PREDICTED: probable WRKY transcription factor 61 isoform X1 | ||||
Refseq | XP_009369335.1 | 1e-109 | PREDICTED: probable WRKY transcription factor 61 isoform X2 | ||||
TrEMBL | A0A2P5F7C8 | 1e-154 | A0A2P5F7C8_TREOI; WRKY domain containing protein | ||||
STRING | XP_009369334.1 | 1e-109 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF650 | 34 | 134 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15130.1 | 3e-55 | WRKY DNA-binding protein 72 |