PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PK29021.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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Family | ERF | ||||||||
Protein Properties | Length: 93aa MW: 10249.1 Da PI: 8.7622 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 28.2 | 4.6e-09 | 66 | 89 | 2 | 26 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng 26 +++GVr+++ +g+++AeIrdp++ng PK29021.1 66 HFRGVRRRP-WGKYAAEIRDPKKNG 89 58*******.***********9998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 3.5E-10 | 66 | 92 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 11.548 | 66 | 93 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 6.54E-6 | 66 | 92 | IPR016177 | DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 93 aa Download sequence Send to blast |
XTDLALLDSI SQYLLQDDFN LSNVSCSFNV GSSISSPPPP PITDGASTDH GCSLEVARER 60 KIPVMHFRGV RRRPWGKYAA EIRDPKKNGA RVX |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015869086.1 | 1e-18 | ethylene-responsive transcription factor 2-like | ||||
Refseq | XP_015902192.1 | 5e-18 | ethylene-responsive transcription factor ERF098-like | ||||
TrEMBL | A0A371E5V4 | 1e-17 | A0A371E5V4_MUCPR; Ethylene-responsive transcription factor 13 (Fragment) | ||||
STRING | XP_009341338.1 | 9e-16 | (Pyrus x bretschneideri) | ||||
STRING | XP_010089319.1 | 8e-16 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF512 | 33 | 157 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51190.1 | 3e-14 | ERF family protein |