 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PK28773.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
|
| Family |
MYB |
| Protein Properties |
Length: 326aa MW: 37458.8 Da PI: 9.1257 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PK28773.1 | genome | CCBR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 51 | 3.3e-16 | 85 | 130 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg W + Ed +l+++v+q+G+ +W++Ia+ + gR++k+c++rw++
PK28773.1 85 RGHWRPIEDAKLKELVTQYGPQNWNLIAENLE-GRSGKSCRLRWFNQ 130
899*****************************.***********996 PP
|
| 2 | Myb_DNA-binding | 53.2 | 6.7e-17 | 137 | 180 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
r ++++eE+e+l+ a++++G++ W+ Iar ++ gRt++ +k++w+
PK28773.1 137 RRAFSEEEEERLLGAHRLYGNK-WAMIARLFP-GRTDNAVKNHWHV 180
678*******************.*********.***********96 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0051782 | Biological Process | negative regulation of cell division |
| GO:0071367 | Biological Process | cellular response to brassinosteroid stimulus |
| GO:0005634 | Cellular Component | nucleus |
| GO:0001046 | Molecular Function | core promoter sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 326 aa
Download sequence Send
to blast |
KNMSFIPSPP QLSLFKTSCD EMGFQILSSS SEKTKKEWIF PNQMENREEK RISDLNVFDE 60
IPEREEIRIR TTSGVKNVHT KLCARGHWRP IEDAKLKELV TQYGPQNWNL IAENLEGRSG 120
KSCRLRWFNQ LDPRINRRAF SEEEEERLLG AHRLYGNKWA MIARLFPGRT DNAVKNHWHV 180
IMARKHREQS NVYKRRRPSS SSTSSSCHSQ ILVPKVIDMT LSTNNNDHNY NNGSSTTEST 240
ISNTINDHES ISTCTELSLT PSSTSHHYGL KNGSFDKLLS LYKRRVGIGQ SDSNSENSAE 300
YYSVATNKSI NLTMFDPNQS QNIKED
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor required for sugar partitioning from leaves to anthers during male reproductive development. Required for the production of functional pollen grains. Binds to the promoter of the anther-specific sugar transporter MST8 and regulates its expression. Regulates the expression of genes involved in sugar partitioning in flower, such as the sugar transporter SUT3, the invertase INV4, the UDP-glucose pyrophosphorylase UGP2 and the starch synthase WAXY. {ECO:0000269|PubMed:20305120}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Induced by wounding. {ECO:0000269|PubMed:20305120}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | KM034632 | 9e-59 | KM034632.1 Jatropha curcas clone JcMYB011 MYB family protein gene, complete cds. |
| Publications
? help Back to Top |
- Leonard LM,Follette VM
Sexual functioning in women reporting a history of child sexual abuse: review of the empirical literature and clinical implications.
Annu Rev Sex Res, 2002. 13: p. 346-88
[PMID:12836736] - Wang L,Li X,Chen Z
Sulfated modification of the polysaccharides obtained from defatted rice bran and their antitumor activities.
Int. J. Biol. Macromol., 2009. 44(2): p. 211-4
[PMID:19135473] - Wang L,Huang H,Wei Y,Li X,Chen Z
Characterization and anti-tumor activities of sulfated polysaccharide SRBPS2a obtained from defatted rice bran.
Int. J. Biol. Macromol., 2009. 45(4): p. 427-31
[PMID:19549538] - Zhang H, et al.
Carbon starved anther encodes a MYB domain protein that regulates sugar partitioning required for rice pollen development.
Plant Cell, 2010. 22(3): p. 672-89
[PMID:20305120] - Zhang H, et al.
Mutation in CSA creates a new photoperiod-sensitive genic male sterile line applicable for hybrid rice seed production.
Proc. Natl. Acad. Sci. U.S.A., 2013. 110(1): p. 76-81
[PMID:23256151] - Zhu X, et al.
Brassinosteroids promote development of rice pollen grains and seeds by triggering expression of Carbon Starved Anther, a MYB domain protein.
Plant J., 2015. 82(4): p. 570-81
[PMID:25754973] - Li X, et al.
Metabolic and transcriptomic signatures of rice floral organs reveal sugar starvation as a factor in reproductive failure under heat and drought stress.
Plant Cell Environ., 2015. 38(10): p. 2171-92
[PMID:25828772] - Shaar-Moshe L,Hübner S,Peleg Z
Identification of conserved drought-adaptive genes using a cross-species meta-analysis approach.
BMC Plant Biol., 2015. 15: p. 111
[PMID:25935420]
|
