PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PK26157.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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Family | NAC | ||||||||
Protein Properties | Length: 295aa MW: 33987.4 Da PI: 6.5147 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 165.7 | 1.7e-51 | 9 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 lppGfrFhPtdeelv++yL++k+++ ++ + +ike+d+yk++Pw+Lp+++ +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ + + PK26157.1 9 LPPGFRFHPTDEELVNHYLCRKCSSLPIAV-PIIKEIDLYKFDPWQLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGK--PKPL 105 79*************************999.88***************7666789*************************************98..789* PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 g+kk Lvfy g+apkg kt+W+mheyrl PK26157.1 106 GIKKALVFYAGKAPKGIKTNWIMHEYRL 133 **************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 7.06E-62 | 3 | 159 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 60.089 | 9 | 159 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.4E-27 | 10 | 133 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 295 aa Download sequence Send to blast |
MTSTGELILP PGFRFHPTDE ELVNHYLCRK CSSLPIAVPI IKEIDLYKFD PWQLPEMALY 60 GEKEWYFFSP RDRKYPNGSR PNRAAGTGYW KATGADKPIG KPKPLGIKKA LVFYAGKAPK 120 GIKTNWIMHE YRLANVDRSA GKKNNSRLDD WVLCRIYNKK GSIEKNYPAT NQVMKTEEFP 180 EIEDTKPHII PSVLHNDHFY MDTSDSVPKL HTDSSGSEHV LSPEFTCDRE VQSEPKWNTV 240 SDDVLSNAFD FDFNYMDGFS DDPFGSQLQI QYSNPMDRLS PLQDMFSFNF MQKPY |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 6e-80 | 3 | 165 | 9 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021274745.1 | 1e-159 | NAC domain-containing protein 2-like | ||||
Swissprot | Q39013 | 1e-128 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A2P5CL93 | 0.0 | A0A2P5CL93_PARAD; NAC domain containing protein | ||||
STRING | EOX92686 | 1e-154 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1258 | 34 | 108 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-119 | NAC family protein |