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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PK24978.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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Family | bZIP | ||||||||
Protein Properties | Length: 292aa MW: 32108.5 Da PI: 10.4557 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 52.7 | 9.3e-17 | 219 | 273 | 4 | 58 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 ++r +r++kNRe+A rsR+RK+a++ eLe v++L++eN++L+ + +++++e+a+ PK24978.1 219 DRRNKRMIKNRESAARSRARKQAYTNELELVVAQLSEENERLRRRQNQINEEAAA 273 689************************************************9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.8E-14 | 216 | 280 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.5E-13 | 218 | 274 | No hit | No description |
PROSITE profile | PS50217 | 11.312 | 218 | 270 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 2.04E-23 | 220 | 273 | No hit | No description |
SuperFamily | SSF57959 | 6.25E-11 | 220 | 272 | No hit | No description |
Pfam | PF00170 | 2.1E-13 | 220 | 272 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 223 | 238 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009911 | Biological Process | positive regulation of flower development | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:2000028 | Biological Process | regulation of photoperiodism, flowering | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence Send to blast |
MSSSSGAEEI EISNTSSTSE TRRRRRRNNS LSLHNTGSSS SSSSKKSFSS SSTSSRTSST 60 APSTTKAMEE VWKDLNLTSL SETTNTVTVV PPPPPPPQLN NINNNHTNYR NMIYQDFLAR 120 PFCTDRPPTT MVPPPAPSPD STLFGSPLPQ PLTALSLNSG PEFPFLDGSL TDPSLHPNNP 180 ISNVSSFTSP FETLDSSSCL LNTFGKKRFQ TENGSASGDR RNKRMIKNRE SAARSRARKQ 240 AYTNELELVV AQLSEENERL RRRQNQINEE AAAAADKLPK KRSLQRTLTA PF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 21 | 26 | RRRRRR |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor required for the transition to flowering promoted by FT. {ECO:0000269|PubMed:16099979, ECO:0000269|PubMed:16099980}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018829596.1 | 4e-67 | PREDICTED: protein FD isoform X2 | ||||
Swissprot | Q84JK2 | 7e-55 | FD_ARATH; Protein FD | ||||
TrEMBL | A0A2P5BXJ0 | 3e-69 | A0A2P5BXJ0_PARAD; Basic-leucine zipper transcription factor | ||||
STRING | EOX90780 | 3e-57 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3755 | 32 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 3e-33 | bZIP family protein |