PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PK24738.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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Family | bZIP | ||||||||
Protein Properties | Length: 375aa MW: 42075.5 Da PI: 8.8215 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 24.5 | 5.8e-08 | 242 | 288 | 17 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 A+rsR RK+++i+eLe+ v++L+ae ++ ele l+++ l +e+ PK24738.1 242 AQRSRVRKLQYIAELERNVQALQAEGSEVTAELEFLNQQNLILSMEN 288 89***********************************9998887776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 0.0019 | 231 | 290 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 1.42E-15 | 233 | 281 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 9.2E-6 | 242 | 285 | No hit | No description |
SuperFamily | SSF57959 | 6.19E-6 | 242 | 284 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 375 aa Download sequence Send to blast |
MANSKGSTNF RSLMYSGKHA LLPPKSPFPS VSPSYADYVV SPAVGSKAVQ KPREGNSHHQ 60 RTSSESFLAE EQPSWLDDLL NEPETPVRRG GHRRSSSDSF AYVDAINHSN IDYSAQDDFK 120 YRNLVSTPSW GSQDFDHHKD LRHASFYAEM NMAKQKNKAW DSSLNVNIPG GLPSGKDIIS 180 RQGSGSFCMP LEADGHPSTA SEKHDLVETS SHDSKTSDKK DSPGIRPSSS DTDTKRAKQQ 240 FAQRSRVRKL QYIAELERNV QALQAEGSEV TAELEFLNQQ NLILSMENKA LKQRLESLAQ 300 EQLIKYLEHE VLEREIGRLK TLYKQQQQPP PQQPPPSSSH RRTNSRDLES QFANLSMKHK 360 DSNSGRDSVT GQLRI |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024025309.1 | 0.0 | uncharacterized protein At4g06598 | ||||
Swissprot | Q8W3M7 | 5e-69 | Y4598_ARATH; Uncharacterized protein At4g06598 | ||||
TrEMBL | A0A2P5AGN0 | 0.0 | A0A2P5AGN0_PARAD; Basic-leucine zipper transcription factor | ||||
STRING | XP_010102449.1 | 0.0 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5123 | 26 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G58110.2 | 1e-100 | bZIP family protein |
Publications ? help Back to Top | |||
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