PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PK24620.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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Family | NAC | ||||||||
Protein Properties | Length: 161aa MW: 18915.7 Da PI: 9.9632 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 85.4 | 1.1e-26 | 6 | 129 | 2 | 127 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 +Gf F+Pt+++++ ++L+ k g + el+ i+ev di++++P +L + k++++++ew+f + ++++++ knr+tk+g+Wk tg+ k++ PK24620.1 6 LVGFTFSPTEQQVI-NHLRLKNLGMDSELDPYIAEVdDILEFDPCELAAksKLRSNKDEWWFLYRLFYRSSRSQSKNRKTKTGFWKVTGRGKKIEG---- 100 58************.99*********999777****99*********84246777778**999999999999**********************87.... PP NAM 99 lvglkktLvfykgrapkgektdWvmheyr 127 vg k L+fykg+ ++++ktd +m+e+ PK24620.1 101 SVGEKSYLTFYKGSCNSSQKTDYTMQEFY 129 89*************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.44E-26 | 5 | 143 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 27.699 | 5 | 151 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.0E-13 | 7 | 129 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence Send to blast |
NPPMVLVGFT FSPTEQQVIN HLRLKNLGMD SELDPYIAEV DDILEFDPCE LAAKSKLRSN 60 KDEWWFLYRL FYRSSRSQSK NRKTKTGFWK VTGRGKKIEG SVGEKSYLTF YKGSCNSSQK 120 TDYTMQEFYI PPHHHLHQDE FILVICSLKW KLVSRKRGRK S |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF18500 | 2 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01550.1 | 3e-20 | NAC domain containing protein 69 |