![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PK24429.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
|
||||||||
Family | VOZ | ||||||||
Protein Properties | Length: 446aa MW: 50042.2 Da PI: 5.0714 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 418.4 | 1.2e-128 | 211 | 427 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdlsl 100 pppsaf+gpkcalwdc+rpaqgs+w+qdycss+h++lalneg pg++pvlrp+gi++kd++lf+als k+qgkevgipecegaa++k+pwna+elfdlsl PK24429.1 211 PPPSAFMGPKCALWDCSRPAQGSKWCQDYCSSCHSVLALNEGVPGIAPVLRPTGIGMKDSPLFSALSLKIQGKEVGIPECEGAANTKCPWNAPELFDLSL 310 89************************************************************************************************** PP VOZ 101 legetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakgkv 200 l+ge +rewlffdkpr+afesgnrkqr lpdy+grgwhesrkqvmkefgglkrsyymdpqps+s+ewhlyeyein++ ++alyrlelklv++k+s+kgk PK24429.1 311 LQGEKLREWLFFDKPRKAFESGNRKQRGLPDYNGRGWHESRKQVMKEFGGLKRSYYMDPQPSTSHEWHLYEYEINNYTTCALYRLELKLVEGKRSPKGKG 410 **************************************************************************************************** PP VOZ 201 skdsladlqkklgrlta 217 +dsladlqkk+grlta PK24429.1 411 LNDSLADLQKKMGRLTA 427 ***************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 446 aa Download sequence Send to blast |
MLNDSKSKCE SVSHQNLKEK TKHRVDDLQR IFSNLESARK DSRPGDIAVF EEQVHQMLRE 60 WKVELSEPTP ASSLLGGSLG SFSEELARLL QQYDVEDDAT SPLKELPHPK PEPDPELNLE 120 NFDVGNFSAF ELDYFDNKEP QDHGFQGFPE LKGSGLDFHE TVPNDSNLIT GLEHQQFDMY 180 QDFSQGLIVG ANSINQCGQD PLPNVLPDIS PPPSAFMGPK CALWDCSRPA QGSKWCQDYC 240 SSCHSVLALN EGVPGIAPVL RPTGIGMKDS PLFSALSLKI QGKEVGIPEC EGAANTKCPW 300 NAPELFDLSL LQGEKLREWL FFDKPRKAFE SGNRKQRGLP DYNGRGWHES RKQVMKEFGG 360 LKRSYYMDPQ PSTSHEWHLY EYEINNYTTC ALYRLELKLV EGKRSPKGKG LNDSLADLQK 420 KMGRLTAEAP IDDGNSSMTK INTTQK |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Regulation -- Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_024019795.1 | 0.0 | transcription factor VOZ1 isoform X1 | ||||
Swissprot | Q9SGQ0 | 1e-173 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | A0A2P5E7P1 | 0.0 | A0A2P5E7P1_TREOI; Cytochrome c-like domain containing protein | ||||
STRING | XP_010093981.1 | 0.0 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1498 | 34 | 94 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G28520.2 | 1e-165 | vascular plant one zinc finger protein |
Publications ? help Back to Top | |||
---|---|---|---|
|