PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PK24205.1

Organism

Cannabis sativa

Taxonomic ID

3483

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis

Family

bZIP

Protein Properties

Length: 326aa MW: 36128.7 Da PI: 9.5697

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PK24205.1	genome	CCBR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49.8	7.2e-16	256	306	5	56
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +r++r++kNRe+A rsR+R++a++ eLe+kv Le+eN++L+ + +e++k+ PK24205.1 256 RRQKRMIKNRESAARSRARRQAYTHELENKVSRLEEENEKLR-RQKEIEKML 306 79****************************************.778888876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.5E-14	246	299	No hit	No description
SMART	SM00338	1.9E-12	252	324	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.634	254	299	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	7.1E-13	256	299	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.69E-10	256	301	No hit	No description
PROSITE pattern	PS00036	0	259	274	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009737	Biological Process	response to abscisic acid
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 326 aa Download sequence Send to blast
MGSQGGAVQD PKLQSLTRQG SLYNLTLDEV QNQLGDLGKP LGSMNLDELL KSVWSAEANQ 60 ATVMGVDNSS AQASQGASAS SLPRQGSLTL FTDLSKKTVD EVWKDIQQKK SVDNERKAQD 120 RHPTLGEMTL EDFLVKAGVV AKTPSSQKGV GPVLGVDPIA PAQHDISQHI QWMQYQLPPV 180 QQSQRQHQLN SMAVFMQGHS VQQPLPDSGN PMLEAAYSEN QMIMSPSSLM GALSDTQTPG 240 RKRVAPEDVV EKTVERRQKR MIKNRESAAR SRARRQAYTH ELENKVSRLE EENEKLRRQK 300 EIEKMLPSAP SPEPKNQLRR TSSAPF

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00409	DAP	Transfer from AT3G56850	Download

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024031171.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	1e-114	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A2P5EXZ4	0.0	A0A2P5EXZ4_TREOI; Basic-leucine zipper transcription factor
STRING	XP_010111311.1	1e-173	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1320	34	105

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	1e-106	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]