PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK21698.1
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family bZIP
Protein Properties Length: 536aa    MW: 59972.1 Da    PI: 7.6021
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK21698.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.25.6e-11245284544
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 
                k  rr+++NReAAr+sR+RKka++++Le    +L++  ++
  PK21698.1 245 KTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQE 284
                7789************************876666655554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.7E-8238287No hitNo description
SMARTSM003383.7E-9241305IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.289243287IPR004827Basic-leucine zipper domain
PfamPF001703.4E-8245285IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.67E-7245287No hitNo description
CDDcd147085.13E-23245297No hitNo description
PROSITE patternPS000360248263IPR004827Basic-leucine zipper domain
PfamPF141441.9E-31336410IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 536 aa     Download sequence    Send to blast
MGFSRAGNNN CFKEEKFLVD QAAEATKLLG TSFMASSIKG NNNNNQTSNS TSDETPLLFQ  60
HQHHHHQIQG HHHQHPNQIP YNMINQSSSS SSLGNFISKD SNSTSGAYDL GELDQALFLY  120
LDGQDHHPSN NFQDQHHHHQ RQSSGGTGMR PPTLNIFPSQ PMHAVEPASS TKGSPPMSGS  180
IHNSKRPSDP SAMELANSTR NDNNSTPAPS LPDSAANKVI KREGNNRKGP TSSSEQEGPK  240
TPDPKTLRRL AQNREAARKS RLRKKAYVQQ LESSRIKLTQ LEQELQRARA QGMFFNGGTL  300
VGGEQGLPIG INNTSQEAVV FDMEYGRWQE EQHRLMCELR AAVQEHLPEN ELRIYVENCL  360
AHYDLMMNLK GMVAKSDVFH LVSGMWKTPA ERCFMWIGGF RPSELIKIIL SQIEPLTEQQ  420
ILGICGLQQS TQETEEALSQ GLESLNQSLS DTITSDSLSC PPNMANYMGQ MAIAMNKLST  480
LEGFVRQADH LRHQTLHRLH QLLTTRQAAR CLLAIAEYFH RLRALSSLWL TRSRQE
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010111398.10.0bZIP transcription factor TGA10
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A2P5BTZ00.0A0A2P5BTZ0_PARAD; Basic-leucine zipper transcription factor
STRINGXP_010111398.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47313455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-171bZIP family protein