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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PK21227.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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Family | bZIP | ||||||||
Protein Properties | Length: 239aa MW: 26789.2 Da PI: 6.2548 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.1 | 6e-11 | 106 | 149 | 5 | 48 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 kr +r NR +A+rsR RK+++i eLe+ v +L+ae + L + PK21227.1 106 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPR 149 8999********************************98877655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.6E-13 | 102 | 166 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.622 | 104 | 156 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.5E-11 | 106 | 157 | No hit | No description |
SuperFamily | SSF57959 | 2.11E-11 | 106 | 160 | No hit | No description |
Pfam | PF00170 | 1.9E-9 | 106 | 149 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 7.41E-22 | 107 | 157 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 109 | 124 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence Send to blast |
XLPGSGGHGE FDRFDDEQFM SMFNDEMASM AVAGPNVSSS NPSTPSDHNS INDEKEMQVD 60 RSSSKQQQHV KNESEEVDSQ CNSDSNPNPN GTTTTNAAND RIIDPKRVKR ILANRQSAQR 120 SRVRKLQYIS ELERSVTSLQ AEVSVLSPRV AFLDHQRLLL NVDNSALKQR IAALAQDKIF 180 KDAHQEALKR EIERLRQVYH QQNMNKMENN NVGQSPSSMG DTTKSSIDKN DQQLLNVSS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator. {ECO:0000269|PubMed:17719007}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023928738.1 | 1e-111 | basic leucine zipper 61-like | ||||
Swissprot | Q9M2K4 | 3e-92 | BZP61_ARATH; Basic leucine zipper 61 | ||||
TrEMBL | A0A2P5E7U2 | 1e-117 | A0A2P5E7U2_TREOI; Basic-leucine zipper transcription factor | ||||
STRING | XP_006469052.1 | 1e-107 | (Citrus sinensis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2011 | 34 | 88 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58120.1 | 5e-81 | bZIP family protein |
Publications ? help Back to Top | |||
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