PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Gene Ontology |

Function |

Regulation |

Orthologous Group |

Publication

Basic Information? help Back to Top

TF ID

PK19495.1

Organism

Cannabis sativa

Taxonomic ID

3483

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis

Family

VOZ

Protein Properties

Length: 484aa MW: 53683.4 Da PI: 5.9585

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PK19495.1	genome	CCBR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	444.5	1.2e-136	207	423	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdlsl 100 pppsaflgpkcalwdc+rpaqg +w+qdycssfha+lalneg+pg++pvlrp+gi+lkdgllfaalsak+qgk+vgipecegaatakspwna+elfdl + PK19495.1 207 PPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDGLLFAALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLLV 306 89************************************************************************************************ PP VOZ 101 legetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakgkv 200 legetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvm+efgglkrsyymdpqp+++ ewhlyeyein++da+alyrlelkl+d+kk+ak+k+ PK19495.1 307 LEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHIEWHLYEYEINKCDACALYRLELKLADGKKNAKAKI 406 ************************************************************************************************ PP VOZ 201 skdsladlqkklgrlta 217 ++ds+adlqk++grl+a PK19495.1 407 TNDSVADLQKQMGRLSA 423 *************97 PP

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009408	Biological Process	response to heat
GO:0009414	Biological Process	response to water deprivation
GO:0009631	Biological Process	cold acclimation
GO:0009816	Biological Process	defense response to bacterium, incompatible interaction
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0048578	Biological Process	positive regulation of long-day photoperiodism, flowering
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence Send to blast
MDKGSKSKCK SVTHKLFKDK AKNRVDDLQA VFMDLQFARK ESRTIDMAVL EEQVNQMLRE 60 WKAELNEPSP ASSLQQGGNP GSFSSDICRL LQLCEEEDDA TSPLAAPKPE PTDQSFQVGE 120 TVVFHEGFGM NQVQQEHGFP LVDCKNSTSR VCNVSANNLE GATHFDYHQF ELHQEFGHNL 180 YADFNGTGVS GEDALPHISS YLPSICPPPS AFLGPKCALW DCPRPAQGLD WCQDYCSSFH 240 AALALNEGPP GMAPVLRPGG IGLKDGLLFA ALSAKAQGKD VGIPECEGAA TAKSPWNAPE 300 LFDLLVLEGE TIREWLFFDK PRRAFESGNR KQRSLPDYSG RGWHESRKQV MNEFGGLKRS 360 YYMDPQPLNH IEWHLYEYEI NKCDACALYR LELKLADGKK NAKAKITNDS VADLQKQMGR 420 LSAEFPSPES KRSVKGRAKL TAKVGVGNVY STTNRVPSTN GTFGYGLGAP YDFLVDNMTE 480 YYLT

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence Send to blast

MDKGSKSKCK SVTHKLFKDK AKNRVDDLQA VFMDLQFARK ESRTIDMAVL EEQVNQMLRE  60
WKAELNEPSP ASSLQQGGNP GSFSSDICRL LQLCEEEDDA TSPLAAPKPE PTDQSFQVGE  120
TVVFHEGFGM NQVQQEHGFP LVDCKNSTSR VCNVSANNLE GATHFDYHQF ELHQEFGHNL  180
YADFNGTGVS GEDALPHISS YLPSICPPPS AFLGPKCALW DCPRPAQGLD WCQDYCSSFH  240
AALALNEGPP GMAPVLRPGG IGLKDGLLFA ALSAKAQGKD VGIPECEGAA TAKSPWNAPE  300
LFDLLVLEGE TIREWLFFDK PRRAFESGNR KQRSLPDYSG RGWHESRKQV MNEFGGLKRS  360
YYMDPQPLNH IEWHLYEYEI NKCDACALYR LELKLADGKK NAKAKITNDS VADLQKQMGR  420
LSAEFPSPES KRSVKGRAKL TAKVGVGNVY STTNRVPSTN GTFGYGLGAP YDFLVDNMTE  480
YYLT

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010111154.1	0.0	transcription factor VOZ1 isoform X1
Refseq	XP_024031048.1	0.0	transcription factor VOZ1 isoform X1
Refseq	XP_024031049.1	0.0	transcription factor VOZ1 isoform X1
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A2P5C7R2	0.0	A0A2P5C7R2_TREOI; VOZ1 transcription factor
STRING	XP_010111154.1	0.0	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1498	34	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]