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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PK19243.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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Family |
HSF |
Protein Properties |
Length: 238aa MW: 27187.2 Da PI: 6.634 |
Description |
HSF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PK19243.1 | genome | CCBR | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HSF_DNA-bind | 110.8 | 9.4e-35 | 29 | 120 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98
Fl k+y ++ed++++e+isw+++g++fvv+++ efa+++Lp+ Fkhsnf+SFvRQLn+YgF+kv +++ weF +++F+kg+k++l++i+
PK19243.1 29 FLLKTYMLVEDPATDEVISWNAQGTAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATNR---------WEFCNDKFRKGEKDHLCEIR 116
9****************************************************************999.........******************** PP
XXXX CS
HSF_DNA-bind 99 rkks 102
r+k
PK19243.1 117 RRKA 120
*985 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0046686 | Biological Process | response to cadmium ion |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 238 aa
Download sequence Send
to blast |
MDHHNNDHVL ISDQKGLLEY MRKSSPPPFL LKTYMLVEDP ATDEVISWNA QGTAFVVWQP 60 AEFARDLLPT LFKHSNFSSF VRQLNTYGFR KVATNRWEFC NDKFRKGEKD HLCEIRRRKA 120 WANNNNKQQS TTTAATATIE EEGSVAAAVG GRGGHVVVVE SDEDQRSSST SSSSELFTTL 180 VDENKRLKKE NGVLSFELRN MKNKCRELLD LVAKYENDHD DQRPKLFGVR LEVEGEVX
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE). |