|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
PK16897.4 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
|
Family |
WRKY |
Protein Properties |
Length: 417aa MW: 46433.9 Da PI: 6.5085 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PK16897.4 | genome | CCBR | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 108.2 | 4e-34 | 232 | 289 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK vk+s+fprsYYrCtsa+C+vkk+vers +dp+vv++tYeg+H+h+
PK16897.4 232 EDGYRWRKYGQKAVKNSPFPRSYYRCTSASCNVKKRVERSFTDPSVVVTTYEGQHTHP 289
8********************************************************8 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009624 | Biological Process | response to nematode |
GO:0009733 | Biological Process | response to auxin |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 417 aa
Download sequence Send
to blast |
MEMKRKMMMT KDSSNMMMMM QGSSNNSSSL SDIISSNGSN YFPMFESATA DQFFGGENNK 60 GSNLGFMELL GVHDYFTTTN IPPAPSPFFD FPALLASTNT VPTSTTTNIT STDHDPFIAI 120 PKKEVVINSD ACLNSTSNIN NNINNQPATP NTSSISSASS TDALNEEQTN NNKAADPEYQ 180 EEEEEDDDEE EGEDQPPKTT TNKQLKAKKT NQKKQREPRF AFMTKSEVDH LEDGYRWRKY 240 GQKAVKNSPF PRSYYRCTSA SCNVKKRVER SFTDPSVVVT TYEGQHTHPS PLISRPTHHH 300 HTTAAVPPVA AAAFTNMPFQ FRHHGQLPQQ YHFMTDHHHL LSSSSLSLPS NHNNNNNNNN 360 NNSNSFANNN NNNGITTNSS AVAFLHERRF CNPSPAPALI TDHGLLQDIV PSNMRTN
|
3D Structure ? help Back to Top |
|
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1wj2_A | 1e-26 | 224 | 291 | 10 | 77 | Probable WRKY transcription factor 4 |
2lex_A | 1e-26 | 224 | 291 | 10 | 77 | Probable WRKY transcription factor 4 |