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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PK15688.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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Family |
WRKY |
Protein Properties |
Length: 268aa MW: 30457.8 Da PI: 9.0968 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PK15688.1 | genome | CCBR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 102.1 | 3.2e-32 | 196 | 254 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vk++++prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+
PK15688.1 196 LDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHS 254
59********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:1901141 | Biological Process | regulation of lignin biosynthetic process |
GO:1904369 | Biological Process | positive regulation of sclerenchyma cell differentiation |
GO:0001046 | Molecular Function | core promoter sequence-specific DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 268 aa
Download sequence Send
to blast |
MASTSQAMVN QGLYEDEEAV PAQLGFFSYA PNSSYLTLIP PLVCLKNFSS SSSSPPSSTT 60 TTTFLPSSNN NNNNNLSHET LLSSLSSTTA NYSKQREDHF SLSDHHNHYD SGSQLLSLQR 120 STANLRSWGD VNECLGSKRS SIINNGGELG HEYRDHHHHQ HRHIGVSTMK MKKIKGRRKV 180 REPRFCFKTM SEVDVLDDGY KWRKYGQKVV KNTQHPRSYY RCTQDNCRVK KRVERLAEDP 240 RMVITTYEGR HVHSPSHDLE DSQSPSPL
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KP229759 | 1e-94 | KP229759.1 UNVERIFIED: Boehmeria nivea WRKY transcription factor-like (WRKY30) mRNA, complete sequence. |