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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
PK13930.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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Family |
MYB |
Protein Properties |
Length: 243aa MW: 27619.5 Da PI: 8.5164 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PK13930.1 | genome | CCBR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 46.3 | 1e-14 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g W++eEd++l ++ G g+W+ +ar g+ R++k+c++rw +yl
PK13930.1 14 KGLWSPEEDDKLMNYMLNNGQGCWSDVARNAGLQRCGKSCRLRWINYL 61
678*******************************************97 PP
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2 | Myb_DNA-binding | 53 | 8.1e-17 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+++++E+el+++++ +lG++ W+ Ia++++ gRt++++k++w++
PK13930.1 67 RGAFSPQEEELIIHLHSLLGNR-WSQIAARLP-GRTDNEIKNFWNS 110
89********************.*********.***********97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009751 | Biological Process | response to salicylic acid |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0050832 | Biological Process | defense response to fungus |
GO:1901348 | Biological Process | positive regulation of secondary cell wall biogenesis |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 243 aa
Download sequence Send
to blast |
NNNNTNNNNN KLRKGLWSPE EDDKLMNYML NNGQGCWSDV ARNAGLQRCG KSCRLRWINY 60 LRPDLKRGAF SPQEEELIIH LHSLLGNRWS QIAARLPGRT DNEIKNFWNS TVKKRLKNLS 120 SSSTTSPNTS DSSFELKDSS SISMDTNNNN NKIIINNIIP GASSQDQNTM FSTSYLHDLS 180 SPTSLHHLIR PFPAMQFDHH HHHHNNMFGT SNSNEFLNNN INPISSQIAG MVNNNDHDNL 240 GFF
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