|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
PK13609.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
|
Family |
GATA |
Protein Properties |
Length: 312aa MW: 33532.9 Da PI: 5.982 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PK13609.1 | genome | CCBR | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 54.9 | 1.2e-17 | 177 | 211 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C++C + kTp+WR gp g+ktLCnaCG++y++ +l
PK13609.1 177 CTHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRL 211
*******************************9885 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009416 | Biological Process | response to light stimulus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 312 aa
Download sequence Send
to blast |
MDHELPTHHQ QDCFGIDDLL DFSNNDDEQF FSSSSNFDVP QHHHCLPPLL PQTSASAHFF 60 NPPDFTSDLC VPSDDVAELE WLSRFADDSF NDLPTGEIPG ALTYPNDASF AGRARSKRSR 120 VPITGANTSW GSISNQPTPQ ELESSSSISA KTKSKREEAS GSNVNPSSTV SGGARRCTHC 180 ASEKTPQWRT GPMGPKTLCN ACGVRYKSGR LVPEYRPAAE PDICPDTALK LPPESNGAPS 240 PERDDTSTTA PATTGRAGSA LPATARPILL SSPRVSSMLS HGTRVDQCIT TTATASSTRT 300 TVTTFLFHPR SQ
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes. {ECO:0000269|PubMed:12139008}. |
UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes. {ECO:0000269|PubMed:12139008}. |