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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PK13304.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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Family | bHLH | ||||||||
Protein Properties | Length: 325aa MW: 36770.1 Da PI: 6.2511 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 29.8 | 1.1e-09 | 131 | 185 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 +++ hn+ Er RR +i + + L +llP+ + + +k+ + i kA eYI +L PK13304.1 131 KKQEHNAKERIRRMKISETYMALGSLLPStRLSKLKKRWTAPRIIDKALEYIPEL 185 6899*************************665666677**************988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 11.541 | 130 | 185 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 6.0E-7 | 131 | 186 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 6.68E-5 | 131 | 182 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 1.4E-10 | 131 | 190 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.7E-10 | 132 | 198 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 0.001 | 136 | 191 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 325 aa Download sequence Send to blast |
XENINGVSKH GYSHQNHHDS LILQASSENG NVFDVAHDQQ GNNNSINICP NNNVEYYSNM 60 FVDQQENSSI VNTNNLSTGK DLIISSKVLK GRKSSKCNKK NLKSSTIIED KRQTLIQSEV 120 EEEEEKDTLI KKQEHNAKER IRRMKISETY MALGSLLPST RLSKLKKRWT APRIIDKALE 180 YIPELENEIE ELITLKKKTL SAVENIPIVE VVNQNNISSA TLASPVNNSL TVSVNEVKKD 240 EVIIQICRPR NKQKDFPSLL EYIEDQEQGI FIILSASTLH VCDERDCYHI HIQIMNESST 300 SSSNNGNDDS SAMLKEKVIS WLTAN |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2P5F3F9 | 1e-64 | A0A2P5F3F9_TREOI; Basic helix-loop-helix transcription factor |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF18502 | 5 | 6 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71200.1 | 9e-14 | bHLH family protein |