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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PK09781.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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Family | ERF | ||||||||
Protein Properties | Length: 168aa MW: 18936.9 Da PI: 9.1163 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 23.4 | 1.4e-07 | 142 | 164 | 2 | 25 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsen 25 +y+GVr ++ +g+++AeIrdp+ + PK09781.1 142 HYRGVRKRP-WGKYAAEIRDPNRR 164 7********.**********9443 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 5.3E-10 | 141 | 168 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.55E-5 | 142 | 167 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 12.128 | 142 | 168 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence Send to blast |
MALEGEVTTL ELIRQHLLND FGSMDSFINS LNNCTANINT QNQTNHIDHD YSFSSQINQS 60 FKVPKKETTN NDDYCEEANH SFEFQTKLNT SVNTRGHYSK PSSLSQRRPS INVAIPPANS 120 PVPVKVPAMS SSVSDNAPDS RHYRGVRKRP WGKYAAEIRD PNRRGSRV |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024029721.1 | 4e-45 | ethylene-responsive transcription factor ERF105-like | ||||
TrEMBL | A0A2P5BQN2 | 1e-50 | A0A2P5BQN2_PARAD; AP2/ERF transcription factor | ||||
STRING | XP_008234445.1 | 4e-33 | (Prunus mume) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1085 | 34 | 109 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17490.1 | 6e-19 | ethylene responsive element binding factor 6 |