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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PK05989.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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Family | bZIP | ||||||||
Protein Properties | Length: 105aa MW: 12527.3 Da PI: 10.769 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.3 | 2.6e-11 | 1 | 42 | 5 | 46 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 k+ rr +NR AA rsR+RKk++++eLe k+k Le+e ++L PK05989.2 1 KKRRRQVRNRDAAVRSRERKKMYVKELEMKSKYLEGECRRLG 42 7899*********************************98775 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57959 | 6.88E-11 | 1 | 56 | No hit | No description |
Pfam | PF00170 | 1.5E-9 | 1 | 42 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.14 | 1 | 41 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 0.0049 | 1 | 61 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 3.3E-11 | 1 | 56 | No hit | No description |
CDD | cd14704 | 9.80E-13 | 2 | 53 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 4 | 19 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 105 aa Download sequence Send to blast |
KKRRRQVRNR DAAVRSRERK KMYVKELEMK SKYLEGECRR LGRLLQFCYA ENQALRIASS 60 SSYAFGGSTT TKQESAVLFL GMYHHHHHHH FLFSFFGLYS FHNNI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 1 | 20 | KRRRQVRNRDAAVRSRERKK |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in endoplasmic reticulum (ER) stress response (PubMed:21223397, PubMed:22050533, PubMed:22199238). Acts downstream of the ER stress sensors IRE1, BZIP39 and BZIP60 to activate BiP chaperone genes (PubMed:22050533, PubMed:22199238). {ECO:0000269|PubMed:21223397, ECO:0000269|PubMed:22050533, ECO:0000269|PubMed:22199238}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By dithiothreitol-induced endoplasmic reticulum (ER) stress response (PubMed:22050533, PubMed:21223397). Induced by salt stress (PubMed:22050533). {ECO:0000269|PubMed:21223397, ECO:0000269|PubMed:22050533}. |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | FR751556 | 3e-93 | FR751556.1 Humulus lupulus mRNA for basic-leucine zipper (bZip4 gene), cultivar Osvald's 72, clone 3559. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008237894.1 | 9e-34 | PREDICTED: bZIP transcription factor 60 | ||||
Refseq | XP_021600280.1 | 2e-34 | bZIP transcription factor 60-like | ||||
Refseq | XP_021815550.1 | 8e-34 | bZIP transcription factor 60 | ||||
Swissprot | Q69XV0 | 4e-24 | BZP50_ORYSJ; bZIP transcription factor 50 | ||||
TrEMBL | G7ZLA5 | 1e-39 | G7ZLA5_HUMLU; Basic-leucine zipper | ||||
STRING | Lus10040069 | 9e-35 | (Linum usitatissimum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF12009 | 30 | 32 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G42990.1 | 4e-07 | basic region/leucine zipper motif 60 |
Publications ? help Back to Top | |||
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