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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PK05989.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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Family | bZIP | ||||||||
Protein Properties | Length: 250aa MW: 27805.5 Da PI: 4.6204 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 37.7 | 4.4e-12 | 124 | 166 | 4 | 46 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 +k+ rr +NR AA rsR+RKk++++eLe k+k Le+e ++L PK05989.1 124 SKKRRRQVRNRDAAVRSRERKKMYVKELEMKSKYLEGECRRLG 166 6999**********************************98764 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.5E-11 | 118 | 180 | No hit | No description |
SMART | SM00338 | 6.1E-7 | 120 | 185 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.875 | 123 | 165 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.44E-10 | 125 | 180 | No hit | No description |
Pfam | PF00170 | 7.8E-10 | 125 | 165 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14704 | 3.94E-15 | 126 | 177 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 128 | 143 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0030968 | Biological Process | endoplasmic reticulum unfolded protein response | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005789 | Cellular Component | endoplasmic reticulum membrane | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence Send to blast |
LGDELIEGID WDALLEWEPP VLTTDSSTSS PSSDPSSWID EIENLLMKED DQETTDPNPD 60 HEEDNEFCQN FLADILVESP ANESDEVHTA AENDANVFSD GNCNSGEEAV ATEADNQDAD 120 DPVSKKRRRQ VRNRDAAVRS RERKKMYVKE LEMKSKYLEG ECRRLGRLLQ FCYAENQALR 180 IASSSCYAFG GSTTTKQESA RALLGIPAVG FPAMVSSGHH HMPVYPATHS SSTKTTTKSK 240 SRTRSNKIKK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 125 | 144 | KRRRQVRNRDAAVRSRERKK |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00019 | PBM | Transfer from AT1G42990 | Download |
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Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | FR751556 | 0.0 | FR751556.1 Humulus lupulus mRNA for basic-leucine zipper (bZip4 gene), cultivar Osvald's 72, clone 3559. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018843068.1 | 4e-58 | PREDICTED: bZIP transcription factor 60-like | ||||
TrEMBL | G7ZLA5 | 1e-92 | G7ZLA5_HUMLU; Basic-leucine zipper | ||||
STRING | XP_010094499.1 | 5e-54 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF12009 | 30 | 32 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G42990.1 | 3e-11 | basic region/leucine zipper motif 60 |