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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PK04551.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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Family | MYB_related | ||||||||
Protein Properties | Length: 799aa MW: 88900.5 Da PI: 6.7345 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 21.8 | 4.5e-07 | 50 | 92 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT +E+e + a +q G++ +++I +++ + q++++++ + PK04551.1 50 AWTRQEEENFFTALRQVGKN-FEKITCRVQ-SKNKDQVRHYYYRL 92 6*****************99.*********.***********976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 2.17E-9 | 43 | 97 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51293 | 12.464 | 46 | 97 | IPR017884 | SANT domain |
SMART | SM00717 | 6.9E-5 | 47 | 95 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.2E-4 | 48 | 95 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 4.67E-5 | 50 | 93 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 799 aa Download sequence Send to blast |
MESRVILQSE AHLNSDTIAS QEREPGVSSS APINIVPQQP VKKQTRQWAA WTRQEEENFF 60 TALRQVGKNF EKITCRVQSK NKDQVRHYYY RLVRRMNKLL GPGLYLDAKN SKDTNAAMLR 120 WWSLLEKYSC KASKLHLKPR RFKIFIEALE HQLLKDRKKS VRKRPTNGDH SSPTPNTVIN 180 QGRTSGHESR TVKLVLVDSQ NIQKVGSGKA PLKRNVNLSI NRSNNKGDST TMKPARQQRR 240 KPGVVSSAAY KKWEKAAIAG VSLVADAAEH LERTSTDKEI EQNQSTSGQN KSSEPVGQVL 300 FSLPNFPQNP FAESNINSSM KLKLQLFPID DGTRRALEMD KLNPHLELTL SNRKRISSVL 360 ERLNRKWGSS KVASGELMLF PFSVQKENIV GHQSWTLDSV ASAADVYAMI GSPQVFRLRY 420 GWIPTAEHGF ATFQEQAPLP PRSISGEPNV NMEKRDQDMR GTTTMSVPST THQSMDLHED 480 NLVSVNKNHD SAFTSANVVL NEKRYSSAGP RDNLLDSCDP TASDKPWHGK GAGGETSMRQ 540 LRDTDDIRLS NGSGLSPGEW ADSLTNISVG DLLSGVSQDM NANGIDPPPA ESAHCLQQMP 600 FSCDSFDAAI AAHISRQQEK MGCQPTLVSS IWDAEETCDG FLFQKNRVWC HEMESPTGLT 660 TPNACKQTTE TNVMESIHLD EELSEVEEPT DDSARGDPMD DRGLDSQLLE NPAKDFSELA 720 DMYWPESLGP LDLDIPSSKY HSEDLILSDS LSGLNRLIAS SLDAFQNCSF FGLDKKESAS 780 TVEARESVSF SDFKIGSGL |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024028707.1 | 0.0 | TSL-kinase interacting protein 1 isoform X2 | ||||
Swissprot | Q8LJT8 | 0.0 | TKI1_ARATH; TSL-kinase interacting protein 1 | ||||
TrEMBL | A0A2P5FV99 | 0.0 | A0A2P5FV99_TREOI; Homeodomain-like | ||||
STRING | XP_010107483.1 | 0.0 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF9883 | 25 | 31 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36960.3 | 0.0 | TSL-kinase interacting protein 1 |