PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK03324.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family WRKY
Protein Properties Length: 318aa    MW: 36162.5 Da    PI: 7.1573
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK03324.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY68.68.9e-22179237259
                --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                dDg++WrKYGqK + ++++pr+Y+rCt++   gC+++k+v++ +   ++  +tY geH+++
  PK03324.1 179 DDGHAWRKYGQKIILNAKYPRNYFRCTHKydqGCQATKQVQKIE--DEMYRTTYYGEHTCS 237
                8***************************99999*********99..7899*********97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.9E-23163238IPR003657WRKY domain
PROSITE profilePS5081117.81173234IPR003657WRKY domain
SuperFamilySSF1182903.14E-22174237IPR003657WRKY domain
SMARTSM007741.1E-33178238IPR003657WRKY domain
PfamPF031063.5E-23179236IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MGFLSSNNNN NNNAHSSSSS SSSTAQTKIM IIDELVQGRD LANQLHTLLA TASDYQNDTV  60
SAEDLLTKIM DSFTNTLLML KKNNTVISTA ADATDDEIYD VDSKIQRSKT TALEGRIIKS  120
DYEDSQESTI SMTNSVISSN TTTNHHHHHQ QHLIKDRRGS YKRRKTCHTM KKETSTLIDD  180
GHAWRKYGQK IILNAKYPRN YFRCTHKYDQ GCQATKQVQK IEDEMYRTTY YGEHTCSSLN  240
NNKLLGSHHD LILDCPSSPS NTSVLLSFNN NNSKQQQITH PFFSNHHSLK QEDDRFTIND  300
DNNTNNNQTS SSDYNNNH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A3e-22178236868OsWRKY45
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2P5CHL35e-87A0A2P5CHL3_PARAD; WRKY domain containing protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19953486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.16e-37WRKY DNA-binding protein 70