PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PK01104.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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Family | NAC | ||||||||
Protein Properties | Length: 151aa MW: 17494.7 Da PI: 10.086 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 163.8 | 6.3e-51 | 2 | 132 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 + pGfrFhPtdeelv +y ++k+++++l+l ik+vdiyk++PwdLp +++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ ++ PK01104.2 2 MLPGFRFHPTDEELVGFYPNRKIQQHPLPLPIElIKQVDIYKYDPWDLPnLGSSTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSdGT 101 579************************7764444***************556677999**************************************9566 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + +glkk+Lvfy+gra kg ktdW+mhe+rl PK01104.2 102 KCIGLKKSLVFYRGRAAKGMKTDWMMHEFRL 132 67***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.79E-53 | 2 | 136 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 51.825 | 2 | 151 | IPR003441 | NAC domain |
Pfam | PF02365 | 8.7E-25 | 4 | 132 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 151 aa Download sequence Send to blast |
XMLPGFRFHP TDEELVGFYP NRKIQQHPLP LPIELIKQVD IYKYDPWDLP NLGSSTGEKE 60 WYFYCPRDRK YRNSARPNRV TGAGFWKATG TDRPIYSSDG TKCIGLKKSL VFYRGRAAKG 120 MKTDWMMHEF RLPSLTDSTT TTTPSPSKNH K |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-47 | 4 | 132 | 17 | 140 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011468662.1 | 4e-86 | PREDICTED: protein FEZ-like | ||||
Refseq | XP_022774485.1 | 6e-86 | protein FEZ-like | ||||
Swissprot | Q9FIW5 | 6e-79 | NAC94_ARATH; Putative NAC domain-containing protein 94 | ||||
TrEMBL | A0A2I0HZ87 | 3e-85 | A0A2I0HZ87_PUNGR; Uncharacterized protein | ||||
TrEMBL | A0A438HDX1 | 6e-85 | A0A438HDX1_VITVI; Putative NAC domain-containing protein 94 | ||||
STRING | cassava4.1_026973m | 6e-85 | (Manihot esculenta) | ||||
STRING | XP_010029299.1 | 4e-85 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2013 | 34 | 90 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26870.1 | 1e-77 | NAC family protein |