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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PH01003772G0170 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family |
ERF |
Protein Properties |
Length: 269aa MW: 28364.5 Da PI: 7.6447 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PH01003772G0170 | genome | ICBR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.1 | 5.2e-19 | 87 | 137 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ y+GVr+++ +g+Wv+eIr+p++ + r++lg+f tae+Aa+a++ a+ +++g
PH01003772G0170 87 PSYRGVRRRS-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAAFAIKG 137
57*****887.**********843...6**********************99887 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 269 aa
Download sequence Send
to blast |
MEADAIHAPT TSSSDSGSCV INGAQEPSKN SKPKHLKRKR STTFPPPSSQ QAPAEATGGA 60 RGEDSSRCTA IDERATSRKV GTAGRHPSYR GVRRRSWGKW VSEIREPRKK SRIWLGTFPT 120 AEMAARAHDV AAFAIKGSTA HLNFPHLAHV LPHPASTSPA DIQAAAAIAA ADGADQCESS 180 SSVAETTETS SAVSSGMAGS GEQENALFDL PDLLLDLRDG LWCSPIWTAV AADEYDVLHS 240 SSSSYVTKVN EQVPIGTRNM LSGPFALK*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AJ307662 | 4e-85 | AJ307662.1 Oryza sativa genomic DNA fragment, chromosome 2. |
GenBank | AP005006 | 4e-85 | AP005006.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, PAC clone:P0519E06. |
GenBank | AP014958 | 4e-85 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |
GenBank | AY345232 | 4e-85 | AY345232.1 Oryza sativa transcription factor Rap212 mRNA, complete cds. |