 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
PH01002918G0050 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
|
| Family |
bHLH |
| Protein Properties |
Length: 225aa MW: 24777 Da PI: 8.45 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PH01002918G0050 | genome | ICBR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 28.3 | 3.2e-09 | 106 | 153 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR++i +++ L++l+P + +k Ka++L + ++Y + Lq
PH01002918G0050 106 SHSLAERARREKISERMKILQDLVPGC----NKVIGKASVLDEIINYTQALQ 153
8*************************9....677*************99998 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 225 aa
Download sequence Send
to blast |
MAITQIADPN LDKFSVLSSL IPASQSITNL HKLVSLGDKI VNKRADPEAK RLKPMKSSDN 60
NDNLRSEAQT DSGSASKAVD KNPTPPELPK QDYIHVRARR GEATDSHSLA ERARREKISE 120
RMKILQDLVP GCNKVIGKAS VLDEIINYTQ ALQRQVEFLS MKLEAVSAHV NDGIVAFPSK 180
DFGAQPYHTA PGLTFDPQTP REYAQGSTSE WLHMQIGNAY ERVT*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK242645 | 0.0 | AK242645.1 Oryza sativa Japonica Group cDNA, clone: J090025G02, full insert sequence. |
