PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01002775G0190
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family G2-like
Protein Properties Length: 499aa    MW: 54525.5 Da    PI: 6.6511
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01002775G0190genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like993.4e-31119172255
          G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                      +rlrWtp+LH +Fv+av++LGG+e+AtPk +l++m+v gL+++hvkSHLQ+YR+
  PH01002775G0190 119 ARLRWTPDLHMAFVHAVQRLGGQERATPKLVLQMMNVRGLSIAHVKSHLQMYRS 172
                      69***************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.9E-28115173IPR009057Homeodomain-like
PROSITE profilePS5129412.305115175IPR017930Myb domain
SuperFamilySSF466891.13E-13119173IPR009057Homeodomain-like
TIGRFAMsTIGR015572.4E-22120174IPR006447Myb domain, plants
PfamPF002498.2E-9120171IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 499 aa     Download sequence    Send to blast
MVAREEEGMR ELNKEKEVLV ENLEDDEKRS MDSKPLDLNE GVDVESEEGE VGDDEDDGDE  60
DDGGGSTTDV NGSRSSSNNS SINNISRSKK ADKNDGSKSE GSGEQRVLPV RQYNRSKLAR  120
LRWTPDLHMA FVHAVQRLGG QERATPKLVL QMMNVRGLSI AHVKSHLQMY RSKKLDHDGR  180
QIRGAISSVF SPMDFHLMRG DRCFHDMFLQ RAAAVSSRAE QGGFFASRNG GSPEASRLYG  240
LLQHQSSPMR TFDFKNCSFR NQEWAFNQHD MASRKGVKPS SSSTPHLFAS SSLRRWPLAS  300
ATAGACDQRL EASYSAGSGC RPLSRVMAPA MLAVSGRDHR LPFRWPGGDG GNGCYPASSG  360
SAKTRLSDPV VIDEALDSRL EQQKHLEQSA PATPADEVRG KRPPPEVKDC SPDLQLSLSS  420
TTVDTTTDGA KKRKKSTASS EQEMDCCNQF SISLSLSPPT ASMSMQQQEK TRGSSNSSEE  480
AALGQSTLDL TMSIRALE*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A4e-19119174257Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B4e-19119174257Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C4e-19119174257Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D4e-19119174257Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1430434KKRKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01002775G0190
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010234086.10.0uncharacterized protein LOC104583488
TrEMBLI1HZ560.0I1HZ56_BRADI; Uncharacterized protein
STRINGBRADI3G09160.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27543686
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.13e-33G2-like family protein