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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PH01002648G0300 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family |
ERF |
Protein Properties |
Length: 177aa MW: 19193.7 Da PI: 11.5892 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PH01002648G0300 | genome | ICBR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 65.2 | 1.3e-20 | 24 | 73 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp + +r++lg+f tae+Aa+a++aa+++++g
PH01002648G0300 24 RYRGVRRRP-WGKWAAEIRDPQ----KaARVWLGTFATAEDAARAYDAAALRFRG 73
7********.**********93....36************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 177 aa
Download sequence Send
to blast |
MMPSTWTQET EQGLVTAVAS PRRRYRGVRR RPWGKWAAEI RDPQKAARVW LGTFATAEDA 60 ARAYDAAALR FRGSRAKLNF PEEASSLAAA RLRRQPGEDH MGRLPCPERA HRRGANGTTD 120 RFVGNVNGRF LRSWTIGPSP PPPMCSVALA AARPAPPLFC GSGTHGSNGT EKGGED*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CP012610 | 6e-71 | CP012610.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 2 sequence. |