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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
PH01002604G0290 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family |
ERF |
Protein Properties |
Length: 227aa MW: 23258.2 Da PI: 9.787 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PH01002604G0290 | genome | ICBR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 67.4 | 2.8e-21 | 31 | 82 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
++y+GVr ++ +gr++AeIrdp k+ r++lg+f+taeeAa+a++aa+++++g+
PH01002604G0290 31 PHYRGVRKRP-WGRYAAEIRDPA---KKSRVWLGTFDTAEEAARAYDAAAREYRGA 82
68********.**********83...36**************************95 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 227 aa
Download sequence Send
to blast |
MAPRTSEKTM PPAAAGATGL ALGVGGGAGG PHYRGVRKRP WGRYAAEIRD PAKKSRVWLG 60 TFDTAEEAAR AYDAAAREYR GAKAKTNFPF PVLPTAAAAT GGSRSSNSST VESFGGDVQA 120 PMQAMPLPPS LELDLFHRAA AAGAGAGGVR FPFNSYPVTH PYYFFGQASA AAGCHMLKLA 180 APVTVAAVAQ SDSDSSSVVN LAPSPPAVSA KKAPFDLDLN SLPPAEA
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | FP092267 | 0.0 | FP092267.1 Phyllostachys edulis cDNA clone: bphylf055d07, full insert sequence. |