 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PH01002035G0390 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
|
| Family |
WRKY |
| Protein Properties |
Length: 489aa MW: 51193 Da PI: 4.8689 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PH01002035G0390 | genome | ICBR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 97.6 | 8.2e-31 | 234 | 292 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
PH01002035G0390 234 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 292
699************************998****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 489 aa
Download sequence Send
to blast |
MCDYFLQRME GDQAGDLTDI IRAGGAMPVG AADLPSTATE WQLPAEPILF PPPQSSSDGA 60
GPIGDAFGDP FSGLPDPFNS DYPSSSGGSA DFFDAVPDAM DVGMVKVGFV YVAVGGGGGG 120
GGEGGGGGTV DTGGVLDIRK PILSRGVQMP GVSPLSPRAI WPYPVMGGDT VSLGVPMAGQ 180
AVGPGAFDAV AGLQMSSPST GGIKRRKNQA RKVVCIPAPA AATGGRTSGE VVPSDLWAWR 240
KYGQKPIKGS PYPRGYYRCS SSKGCSARKQ VERSRTDPNM LVITYTSEHN HPWPTQRNAL 300
AGSTRSHHAK NSSNNSAAAA SKNNSSHNQQ RPTIKAEPND QTAAAATATT TATTSMATTA 360
TASTSNTLPM AVKEEALVGL EMEKDVNDTS VTVDYHSDLM QQMFNQSYRP MIPEAGHQDD 420
FFADLAELES DPVSLIFSKE YMESRPGGEP DKEKALTKDL DPFMLDWAPT TAAISTAAGS 480
SFEQGQRGL
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | FP098490 | 0.0 | FP098490.1 Phyllostachys edulis cDNA clone: bphyem208o24, full insert sequence. |
