 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PH01001641G0420 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
|
| Family |
bHLH |
| Protein Properties |
Length: 296aa MW: 31601.2 Da PI: 6.8833 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PH01001641G0420 | genome | ICBR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 12.6 | 0.00025 | 174 | 195 | 34 | 55 |
TTS-STCHHHHHHHHHHHHHHH CS
HLH 34 pskKlsKaeiLekAveYIksLq 55
K++Ka+ L A+ YI++L+
PH01001641G0420 174 EISKMDKASLLSDAIAYIQELE 195
5679***************996 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 296 aa
Download sequence Send
to blast |
MARKRVLLRL HALYGGGDEE GADYALRLDR VTGAEMYFLA SMYFSFPEGA GGPGHVLASG 60
RHAWASVDPH PPGWYVRASL AQSAGLRTVV FLPCKGGVLE LGSVVVIRET PEVLRAIQSA 120
FRVEPARPED YTRIFGKDLS RRTQMPPAQT MGCDATWAPQ LGGQTMAARP ANKEISKMDK 180
ASLLSDAIAY IQELEARLRG GEAGPARAEC PVVEVKTMQE EVVLRVTTPL DAHPIAGVLH 240
AIRDSQLSVV ASDVAVADDA VTHTLMVRSA GPERLTAETV LAAMSRGMSS TTPSP*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | FP095230 | 1e-150 | FP095230.1 Phyllostachys edulis cDNA clone: bphylf052e07, full insert sequence. |
