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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PH01001392G0010 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family |
ERF |
Protein Properties |
Length: 248aa MW: 25794.8 Da PI: 4.8383 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PH01001392G0010 | genome | ICBR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 57.1 | 4.3e-18 | 46 | 93 | 1 | 52 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52
+ y+GVr + +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++aa++
PH01001392G0010 46 PSYRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDAAALV 93
57*****998.**********843...6*********************985 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 248 aa
Download sequence Send
to blast |
MPEQEVCSPA SSGGASSSPP ASPVQGERRG GGGGGEKRAR DGGRHPSYRG VRMRAWGKWV 60 SEIREPRKKS RIWLGTFPTP EMAARAHDAA ALVVKGPAAV LNFPDMAAAL PRPASAAPRD 120 VQAAAARAAA MEPSLHQDPA AAAVAAALLP PASAPAKPTP KNCAPADDEL EAIFELPRLD 180 EDAAEPVFGA ASFHDVTPAD QSWCDPVWID DDGYAAHDDL FGLGLGLDLD ADYHGWGQSV 240 GALLWNL*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP003682 | 1e-115 | AP003682.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, PAC clone:P0427B07. |
GenBank | AP014962 | 1e-115 | AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence. |