PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01001302G0370
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family bZIP
Protein Properties Length: 456aa    MW: 48841.3 Da    PI: 7.3265
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01001302G0370genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.87.6e-11312370563
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      +r +r   NR++A rs +RK  +i+eLe kv++L++e ++L  +l +l+  +a l +++
  PH01001302G0370 312 RRVKRILANRLSAARSKERKMRYIQELEHKVQVLQTEATTLSAQLTMLQRDSAGLATQN 370
                      57899999****************************************99998887766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.4E-17308372IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.783310373IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.7E-11312369No hitNo description
PfamPF001703.0E-9312370IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.11E-11312366No hitNo description
CDDcd147031.90E-21313364No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 456 aa     Download sequence    Send to blast
MGDPGAADHA RHLLSPQAAP RSPTPLDLSA ASASASASAY RRLSPSPRPP AHPHVRLPSP  60
YAQIPPGAGG HARSLSQPLF FSLDSLPPPP PYADLAAPPA VPPSQPSSTS DPPPPGLPPR  120
RAGHRRSQSD IPFGFSQLSP PLPPPAPVKR EAATPPEGCR SDGDDAALYD LVNAYMDLDG  180
LDALNSSEDR HDDRDSRASG TRNGSAADSS ENEAESRSTS VDKKDGGKSR HCRSLSVDSF  240
MGKLNFAAGE ESPKLPLPSP SGGLSRSGSG SLDGGAAALF DTEFANGEFT EAEKKKIMAN  300
ERLAEIALTD PRRVKRILAN RLSAARSKER KMRYIQELEH KVQVLQTEAT TLSAQLTMLQ  360
RDSAGLATQN NELKIRLQAM EQQAQLRDAL NEALTAEVQR LKLATGEITD SRMSKGLQQQ  420
MNSQLIQLQQ LQIQQQQQQP SQTQQAQQQQ SQQSA*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01001302G0370
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGU9843780.0GU984378.1 Triticum aestivum cultivar CB037 bZiP-like trancription factor (SF) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025822599.10.0transcription factor RF2a-like
TrEMBLA0A2S3I5680.0A0A2S3I568_9POAL; Uncharacterized protein
STRINGGRMZM2G175280_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62473650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.34e-76bZIP family protein