 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PH01001210G0270 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
|
| Family |
WRKY |
| Protein Properties |
Length: 201aa MW: 21525.8 Da PI: 8.5932 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PH01001210G0270 | genome | ICBR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 98.9 | 3.3e-31 | 112 | 170 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYG+K+vk+s++pr+YYrC+++gC+vkk+ver+++dp++v++tYeg Hnh
PH01001210G0270 112 LDDGYRWRKYGKKSVKNSPNPRNYYRCSTEGCSVKKRVERDRDDPSYVVTTYEGIHNHV 170
59********************************************************5 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 201 aa
Download sequence Send
to blast |
MAYPPPRGGS SSSPYSSSSA ASLSPTFGAA LPGALHHQQQ HLDVLDYFSD EGGPSSVPGA 60
FGTPPPLMPV EPVVPDAGGY YANPRSAAAM AGEAGARTDR IAFRMRSEEE ILDDGYRWRK 120
YGKKSVKNSP NPRNYYRCST EGCSVKKRVE RDRDDPSYVV TTYEGIHNHV SPGTVYYAAQ 180
DAASGRFFVA GIGNQSRLAK *
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Involved in defense responses. May act as positive regulator of salicylic acid (SA)-mediated signaling and negative regulator of jasmonic acid (JA)-mediated signaling (PubMed:21030507). {ECO:0000250, ECO:0000269|PubMed:21030507}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK108555 | 8e-92 | AK108555.1 Oryza sativa Japonica Group cDNA clone:002-144-E10, full insert sequence. |
| GenBank | AY870609 | 8e-92 | AY870609.1 Oryza sativa (japonica cultivar-group) WRKY26 mRNA, complete cds. |
| GenBank | HQ858873 | 8e-92 | HQ858873.1 Oryza sativa Japonica Group isolate UT1750 WRKY transcription factor mRNA, partial cds. |
