![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
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TF ID |
PH01001205G0030 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family |
ERF |
Protein Properties |
Length: 184aa MW: 19748.3 Da PI: 4.5986 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PH01001205G0030 | genome | ICBR | View CDS |
|
Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Phe&pid=PH01001205G0030) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 56.1 | 9.1e-18 | 20 | 69 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr +k +g+Wv+eIr+p gk++r++lg+f ++e Aa a++ a+++l+g
PH01001205G0030 20 QYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSFESPELAAVAHDVAALRLRG 69
69****999.**********8...557*************************98 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 184 aa
Download sequence Send
to blast |
MEVVLDNAGG AAAAGEVAGQ YRGVRKRKWG KWVSEIREPG KKTRIWLGSF ESPELAAVAH 60 DVAALRLRGR EARLNFPDLV HHFRRPATAE PDDVRGAALE AAAQVRFRPD LVMQPDGCGG 120 VAGADRLGDA AWDVLLGADE LAAESPIMWA ELAEAMLMAP PVWEGCAADN DEWAQGLLWD 180 PSV*
|
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ727511 | 7e-89 | KJ727511.1 Zea mays clone pUT5370 AP2-EREBP transcription factor (EREB106) gene, partial cds. |