PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01001112G0650
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family ERF
Protein Properties Length: 172aa    MW: 18332.9 Da    PI: 10.5741
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01001112G0650genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.41e-192373256
              AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
                     +y+GVr ++ +gr++AeIrd ++    ++r++lg+f+t+ eAa a+++a++ l+g+
  PH01001112G0650 23 HYRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDTPVEAALAYDRAARTLRGA 73
                     7********.**********883....5*************************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.12E-292281No hitNo description
PfamPF008479.8E-132372IPR001471AP2/ERF domain
SuperFamilySSF541714.32E-222381IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.4E-312382IPR001471AP2/ERF domain
PROSITE profilePS5103221.9442380IPR001471AP2/ERF domain
SMARTSM003801.5E-332386IPR001471AP2/ERF domain
PRINTSPR003674.1E-102435IPR001471AP2/ERF domain
PRINTSPR003674.1E-104662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
MDLTLRGATS HGGGGARGGS EAHYRGVRKR PWGRYAAEIR DPWKKTRVWL GTFDTPVEAA  60
LAYDRAARTL RGAKAKTNFP DHAHLHHHLH VPPPLPPPQQ TVPFGGIDLN FPSPWRFVYF  120
SPPAAPAPPL PPAASPVAAA PPSTALELVT GPRPGGLPFD LNEPPSLLFG S*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-212380563ATERF1
3gcc_A3e-212380563ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Acts as a transcriptional inhibitor and may regulate other AtERFs (By similarity). {ECO:0000250, ECO:0000269|PubMed:11487705}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01001112G0650
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFP0946500.0FP094650.1 Phyllostachys edulis cDNA clone: bphylf047i23, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003567200.21e-72ethylene-responsive transcription factor 12
SwissprotQ94ID61e-30ERF81_ARATH; Ethylene-responsive transcription factor 12
TrEMBLA0A3B6H0L11e-74A0A3B6H0L1_WHEAT; Uncharacterized protein
STRINGBRADI2G52380.14e-72(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.16e-34ERF domain protein 12